EnhancerDB
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  3. rs574806960[chr9:37409201]
Enhancers that have rs574806960[chr9:37409201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 37388545 37417602 enh10754
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr9 37408940 37409704 vista61918
VISTA
Transcript factors that have rs574806960[chr9:37409201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 37408597 37409948 POLR2A UCSC Txn Factor no Conserved 108550386
chr9 37408805 37409745 PML UCSC Txn Factor no Conserved 108550387
chr9 37408869 37409826 NFIC UCSC Txn Factor no Conserved 108550388
chr9 37408871 37409762 RUNX3 UCSC Txn Factor no Conserved 108550389
chr9 37408928 37409743 FOXM1 UCSC Txn Factor no Conserved 108550390
chr9 37408991 37409740 ATF2 UCSC Txn Factor no Conserved 108550391
chr9 37409016 37409330 EBF1 UCSC Txn Factor no Conserved 108550392
chr9 37409028 37409709 PAX5 UCSC Txn Factor no Conserved 108550393
chr9 37409059 37409700 TCF12 UCSC Txn Factor no Conserved 108550394
chr9 37409062 37409710 TCF3 UCSC Txn Factor no Conserved 108550395
chr9 37409093 37409623 BHLHE40 UCSC Txn Factor no Conserved 108550396
chr9 37409121 37409768 EP300 UCSC Txn Factor no Conserved 108550397
chr9 37409165 37409678 BATF UCSC Txn Factor no Conserved 108550398
chr9 37409183 37409665 RELA UCSC Txn Factor no Conserved 108550399
chr9 37409201 37409206 TFAP2A TRANSFAC yes 83996423
chr9 37409201 37409206 TFAP2A TRANSFAC yes 95351029
chr9 37409201 37409207 MZF1 JASPAR yes 83996424
chr9 37409201 37409207 MZF1 JASPAR yes 95351030
chr9 37409201 37409212 NFKB1 JASPAR yes 83996425
chr9 37409201 37409212 NFKB1 JASPAR yes 95351031
Genes associated with rs574806960[chr9:37409201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More