EnhancerDB
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  3. rs574854517[chr12:50985391]
Enhancers that have rs574854517[chr12:50985391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs574854517[chr12:50985391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50985377 50985398 IRF1 JASPAR yes 120848731
chr12 50985379 50985400 IRF1 JASPAR yes 120848732
chr12 50985383 50985397 IRF7 JASPAR yes 120848733
chr12 50985383 50985404 IRF1 JASPAR yes 120848734
chr12 50985384 50985399 FOXP1 JASPAR yes 120848735
chr12 50985385 50985400 PRDM1 JASPAR yes 120848736
chr12 50985385 50985400 STAT2 JASPAR yes 120848737
chr12 50985385 50985406 IRF1 JASPAR yes 120848738
chr12 50985389 50985410 IRF1 JASPAR yes 120848739
chr12 50985389 50985410 ZNF263 JASPAR yes 120848740
chr12 50985390 50985411 ZNF263 JASPAR yes 120848741
Genes associated with rs574854517[chr12:50985391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More