EnhancerDB
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  3. rs574876377[chr1:8542741]
Enhancers that have rs574876377[chr1:8542741]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574876377[chr1:8542741]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8542739 8542754 FOXP1 JASPAR yes 26560897
chr1 8542740 8542755 FOXP1 JASPAR yes 26560898
chr1 8542740 8542761 IRF1 JASPAR yes 26560899
chr1 8542741 8542756 FOXP1 JASPAR yes 26560900
chr1 8542741 8542762 IRF1 JASPAR yes 26560901
Genes associated with rs574876377[chr1:8542741], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More