EnhancerDB
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  3. rs574896525[chr1:55441357]
Enhancers that have rs574896525[chr1:55441357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55426360 55441461 enh371
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs574896525[chr1:55441357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55441352 55441367 HNF4A JASPAR yes 29012980
chr1 55441353 55441367 NR2F1 JASPAR yes 29012981
chr1 55441353 55441367 RXRB JASPAR yes 29012982
chr1 55441353 55441367 RXRG JASPAR yes 29012983
chr1 55441353 55441368 HNF4G JASPAR yes 29012984
chr1 55441353 55441368 NR2C2 JASPAR yes 29012985
Genes associated with rs574896525[chr1:55441357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More