EnhancerDB
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  3. rs574988729[chr12:46955083]
Enhancers that have rs574988729[chr12:46955083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs574988729[chr12:46955083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46955076 46955091 FOXP1 JASPAR yes 120638391
chr12 46955079 46955100 IRF1 JASPAR yes 120638392
chr12 46955082 46955088 TBP TRANSFAC yes 120638393
chr12 46955083 46955097 SPIC JASPAR yes 120638394
chr12 46955083 46955098 PRDM1 JASPAR yes 120638395
Genes associated with rs574988729[chr12:46955083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More