EnhancerDB
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  3. rs575004006[chr11:69250058]
Enhancers that have rs575004006[chr11:69250058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 69240265 69271075 enh14035
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575004006[chr11:69250058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 69249288 69250378 ZNF143 GTRD no Epithelial (MCF-7) 21499449
chr11 69249288 69250378 ZNF143 GTRD no Epithelial (MCF-7) 107986054
chr11 69249310 69250331 ZNF143 GTRD no Epithelial (MCF-7) 21499450
chr11 69249310 69250331 ZNF143 GTRD no Epithelial (MCF-7) 107986055
chr11 69249323 69250082 ZNF143 GTRD no Epithelial (MCF-7) 21499451
chr11 69249379 69250406 SOX2 GTRD no Neural Stem Cells (H9) 21499452
chr11 69249379 69250406 SOX2 GTRD no Neural Stem Cells (H9) 107986056
chr11 69249400 69250273 TCF7L2 GTRD no Colon (HCT116) 21499453
chr11 69249400 69250273 TCF7L2 GTRD no Colon (HCT116) 107986057
chr11 69249454 69250328 SOX2 GTRD no Neural Stem Cells (H9) 21499454
chr11 69249454 69250328 SOX2 GTRD no Neural Stem Cells (H9) 107986058
chr11 69249497 69250429 SOX2 GTRD no Neural Stem Cells (H9) 21499455
chr11 69249497 69250429 SOX2 GTRD no Neural Stem Cells (H9) 107986059
chr11 69249514 69250301 SOX2 GTRD no Neural Stem Cells (H9) 21499456
chr11 69249514 69250301 SOX2 GTRD no Neural Stem Cells (H9) 107986060
chr11 69249605 69250136 SOX2 GTRD no Neural Stem Cells (H9) 21499457
chr11 69249618 69250202 TCF7L2 GTRD no Colon (HCT116) 21499458
chr11 69249730 69250063 ZNF274 GTRD no Cervix (HeLa-S3) 21499459
chr11 69249767 69250079 ZNF274 GTRD no Liver (HepG2) 21499460
chr11 69249832 69250168 SOX2 GTRD no Neural Stem Cells (H9) 21499461
chr11 69249851 69250367 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21499462
chr11 69249851 69250367 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107986061
chr11 69249874 69250224 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21499463
chr11 69249874 69250224 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107986062
chr11 69249940 69250795 ZNF274 GTRD no Blood (GM12878) 107986063
chr11 69249962 69250252 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21499464
chr11 69249962 69250252 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107986064
chr11 69250041 69250060 CTCF JASPAR yes 39534526
chr11 69250056 69250065 HIC2 JASPAR yes 39534527
Genes associated with rs575004006[chr11:69250058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More