EnhancerDB
  1. Home
  2. SNP
  3. rs575052180[chr1:232749744]
Enhancers that have rs575052180[chr1:232749744]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs575052180[chr1:232749744]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232749403 232749999 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21392289
chr1 232749430 232749894 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392290
chr1 232749616 232750212 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21392291
chr1 232749730 232749744 POU1F1 JASPAR yes 36177206
chr1 232749731 232749744 POU3F3 JASPAR yes 36177207
chr1 232749740 232749744 YY1 TRANSFAC yes 36177208
chr1 232749741 232749755 IRF7 JASPAR yes 36177209
Genes associated with rs575052180[chr1:232749744], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More