EnhancerDB
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  3. rs575220926[chr19:2550276]
Enhancers that have rs575220926[chr19:2550276]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575220926[chr19:2550276]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2549419 2550424 ZNF274 GTRD no Blood (GM12878) 108362402
chr19 2549894 2551536 TCF7L2 GTRD no Colon (HCT116) 21837099
chr19 2549894 2551536 TCF7L2 GTRD no Colon (HCT116) 108362410
chr19 2550042 2551338 TCF7L2 GTRD no Colon (HCT116) 21837100
chr19 2550042 2551338 TCF7L2 GTRD no Colon (HCT116) 108362411
chr19 2550074 2551502 TCF7L2 GTRD no Colon (HCT116) 21837101
chr19 2550074 2551502 TCF7L2 GTRD no Colon (HCT116) 108362412
chr19 2550082 2550304 ZNF274 GTRD no Blood (GM12878) 108362413
chr19 2550270 2550279 NF-IL6 TRANSFAC yes 112073353
chr19 2550271 2550281 CEBPB JASPAR yes 112073354
chr19 2550271 2550281 CEBPD JASPAR yes 112073355
chr19 2550271 2550281 CEBPE JASPAR yes 112073356
chr19 2550271 2550281 CEBPG JASPAR yes 112073357
chr19 2550271 2550282 CEBPB JASPAR yes 112073358
Genes associated with rs575220926[chr19:2550276], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More