EnhancerDB
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  3. rs575225346[chr16:87819341]
Enhancers that have rs575225346[chr16:87819341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs575225346[chr16:87819341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87818760 87819358 ZNF274 GTRD no Liver (HepG2) 21734477
chr16 87819271 87820363 TCF7L2 GTRD no Colon (HCT116) 21734478
chr16 87819299 87820474 ZNF143 GTRD no Epithelial (MCF-7) 21734479
chr16 87819316 87820447 TCF7L2 GTRD no Colon (HCT116) 21734480
chr16 87819338 87819355 ESR1 JASPAR yes 12239199
chr16 87819341 87819362 ZNF263 JASPAR yes 12239200
Genes associated with rs575225346[chr16:87819341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More