EnhancerDB
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  3. rs575288531[chr1:25059853]
Enhancers that have rs575288531[chr1:25059853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575288531[chr1:25059853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25059836 25059854 IRF2 JASPAR yes 27524840
chr1 25059849 25059853 NFE TRANSFAC yes 27524841
chr1 25059853 25059868 FOXP1 JASPAR yes 27524842
Genes associated with rs575288531[chr1:25059853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More