EnhancerDB
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  3. rs575362458[chr1:54780104]
Enhancers that have rs575362458[chr1:54780104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs575362458[chr1:54780104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54780092 54780105 EOMES JASPAR yes 28972319
chr1 54780094 54780104 TBR1 JASPAR yes 28972320
chr1 54780096 54780108 PKNOX1 JASPAR yes 28972321
chr1 54780096 54780108 PKNOX2 JASPAR yes 28972322
chr1 54780096 54780108 TGIF1 JASPAR yes 28972323
chr1 54780096 54780108 TGIF2 JASPAR yes 28972324
Genes associated with rs575362458[chr1:54780104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More