EnhancerDB
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  3. rs575379538[chr17:78754006]
Enhancers that have rs575379538[chr17:78754006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs575379538[chr17:78754006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78753348 78754356 ZNF274 GTRD no Blood (GM12878) 21797286
chr17 78753348 78754356 ZNF274 GTRD no Blood (GM12878) 108307531
chr17 78753482 78754548 ZNF274 GTRD no Blood (GM12878) 21797287
chr17 78753482 78754548 ZNF274 GTRD no Blood (GM12878) 108307532
chr17 78753519 78754174 ZNF274 GTRD no Liver (HepG2) 108307533
chr17 78753535 78754338 ZNF274 GTRD no Blood (GM12878) 21797288
chr17 78753535 78754338 ZNF274 GTRD no Blood (GM12878) 108307534
chr17 78753537 78754308 ZNF274 GTRD no Blood (GM12878) 21797289
chr17 78753537 78754308 ZNF274 GTRD no Blood (GM12878) 108307535
chr17 78753663 78754344 ZNF274 GTRD no Bone Marrow (K562) 108307536
chr17 78753674 78754401 ZNF274 GTRD no Blood (GM12878) 21797290
chr17 78753674 78754401 ZNF274 GTRD no Blood (GM12878) 108307537
chr17 78753693 78754278 ZNF274 GTRD no Blood (GM12878) 21797291
chr17 78753693 78754278 ZNF274 GTRD no Blood (GM12878) 108307538
chr17 78753704 78754653 ZNF274 GTRD no Blood (GM12878) 21797292
chr17 78753704 78754653 ZNF274 GTRD no Blood (GM12878) 108307539
chr17 78753727 78754186 ZNF274 GTRD no Blood (GM12878) 21797293
chr17 78753727 78754186 ZNF274 GTRD no Blood (GM12878) 108307540
chr17 78753747 78754219 ZNF274 GTRD no Liver (HepG2) 108307541
chr17 78753756 78754112 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21797294
chr17 78753756 78754112 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108307542
chr17 78753766 78754669 ZNF274 GTRD no Blood (GM12878) 21797295
chr17 78753766 78754669 ZNF274 GTRD no Blood (GM12878) 108307543
chr17 78753777 78754142 ZNF274 GTRD no Cervix (HeLa-S3) 21797296
chr17 78753777 78754142 ZNF274 GTRD no Cervix (HeLa-S3) 108307544
chr17 78753784 78754206 ZNF274 GTRD no Bone Marrow (K562) 108307545
chr17 78753784 78754208 ZNF274 GTRD no Bone Marrow (K562) 108307546
chr17 78753792 78754255 TCF7L2 GTRD no Colon (HCT116) 21797297
chr17 78753792 78754255 TCF7L2 GTRD no Colon (HCT116) 108307547
chr17 78753803 78754163 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21797298
chr17 78753803 78754163 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108307548
chr17 78753837 78754200 EP300 UCSC Txn Factor no Conserved 108307549
chr17 78753850 78754174 CEBPB UCSC Txn Factor no Conserved 108307550
chr17 78753850 78754174 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108307551
chr17 78753853 78754448 ZNF274 GTRD no Blood (GM12878) 21797299
chr17 78753853 78754448 ZNF274 GTRD no Blood (GM12878) 108307552
chr17 78753854 78754271 ZNF274 GTRD no Blood (GM12878) 21797300
chr17 78753854 78754271 ZNF274 GTRD no Blood (GM12878) 108307553
chr17 78753861 78754050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21797301
chr17 78753861 78754050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108307554
chr17 78753869 78754237 ZNF274 GTRD no Blood (GM12878) 21797302
chr17 78753869 78754237 ZNF274 GTRD no Blood (GM12878) 108307555
chr17 78753870 78754200 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21797303
chr17 78753870 78754200 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108307556
chr17 78753873 78754155 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21797304
chr17 78753873 78754155 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108307557
chr17 78753877 78754141 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108307558
chr17 78753880 78754314 ZNF274 GTRD no Blood (GM12878) 21797305
chr17 78753880 78754314 ZNF274 GTRD no Blood (GM12878) 108307559
chr17 78753885 78754215 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21797306
chr17 78753885 78754215 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108307560
chr17 78753886 78754369 ZNF274 GTRD no Bone Marrow (K562) 108307561
chr17 78753895 78754212 ZNF274 GTRD no Blood (GM12878) 21797307
chr17 78753895 78754212 ZNF274 GTRD no Blood (GM12878) 108307562
chr17 78753900 78754311 ZNF274 GTRD no Bone Marrow (K562) 108307563
chr17 78753903 78754190 ZNF274 GTRD no Bone Marrow (K562) 108307564
chr17 78753905 78754077 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21797308
chr17 78753905 78754077 TCF7L2 UCSC Txn Factor no Conserved 108307565
chr17 78753905 78754077 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108307566
chr17 78753906 78754225 ZNF274 GTRD no Bone Marrow (K562) 108307567
chr17 78753909 78754295 MYOD GTRD no Muscle (Myoblast) 21797309
chr17 78753909 78754295 MYOD GTRD no Muscle (Myoblast) 108307568
chr17 78753914 78754188 ZNF274 GTRD no Blood (GM12878) 21797310
chr17 78753914 78754188 ZNF274 GTRD no Blood (GM12878) 108307569
chr17 78753914 78754247 ZNF274 GTRD no Blood (GM12878) 21797311
chr17 78753914 78754247 ZNF274 GTRD no Blood (GM12878) 108307570
chr17 78753916 78754143 TCF7L2 GTRD no Colon (HCT116) 21797312
chr17 78753916 78754143 TCF7L2 GTRD no Colon (HCT116) 108307571
chr17 78753919 78754108 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108307572
chr17 78753938 78754352 ZNF143 GTRD no Epithelial (MCF-7) 108307573
chr17 78753960 78754283 ZNF274 GTRD no Blood (GM12878) 21797313
chr17 78753960 78754283 ZNF274 GTRD no Blood (GM12878) 108307574
chr17 78753968 78754231 ZNF274 GTRD no Bone Marrow (K562) 108307575
chr17 78753995 78754008 ATF4 JASPAR yes 56278397
chr17 78753997 78754007 CEBPB JASPAR yes 56278398
chr17 78753997 78754007 CEBPD JASPAR yes 56278399
chr17 78753997 78754008 CEBPB JASPAR yes 56278400
Genes associated with rs575379538[chr17:78754006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More