EnhancerDB
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  3. rs575386609[chr17:39061102]
Enhancers that have rs575386609[chr17:39061102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs575386609[chr17:39061102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39060823 39061123 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757160
chr17 39060852 39061188 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757161
chr17 39060960 39061250 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757162
chr17 39060963 39061223 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757163
chr17 39061038 39061697 ZBTB33 GTRD no Lung (A549) 21757164
chr17 39061084 39061523 ZNF143 GTRD no Epithelial (MCF-7) 21757165
chr17 39061086 39061362 ZNF274 GTRD no Liver (HepG2) 21757166
chr17 39061088 39061556 ZNF143 GTRD no Epithelial (MCF-7) 21757167
chr17 39061096 39061116 RREB1 JASPAR yes 54242418
chr17 39061098 39061108 TBX21 JASPAR yes 54242419
chr17 39061098 39061109 TBX20 JASPAR yes 54242420
chr17 39061098 39061109 TBX2 JASPAR yes 54242421
chr17 39061098 39061111 EOMES JASPAR yes 54242422
chr17 39061099 39061107 MGA JASPAR yes 54242423
chr17 39061099 39061107 TBX15 JASPAR yes 54242424
chr17 39061099 39061107 TBX1 JASPAR yes 54242425
chr17 39061099 39061107 TBX4 JASPAR yes 54242426
chr17 39061099 39061107 TBX5 JASPAR yes 54242427
chr17 39061099 39061109 TBR1 JASPAR yes 54242428
Genes associated with rs575386609[chr17:39061102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More