EnhancerDB
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  3. rs575396389[chr6:42373540]
Enhancers that have rs575396389[chr6:42373540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575396389[chr6:42373540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42373529 42373544 FOXP1 JASPAR yes 101718389
chr6 42373530 42373545 FOXP1 JASPAR yes 101718390
chr6 42373530 42373551 IRF1 JASPAR yes 101718391
chr6 42373531 42373546 FOXP1 JASPAR yes 101718392
Genes associated with rs575396389[chr6:42373540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More