EnhancerDB
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  3. rs575398179[chr1:110415982]
Enhancers that have rs575398179[chr1:110415982]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs575398179[chr1:110415982]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110415660 110416320 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328111
chr1 110415770 110416140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328112
chr1 110415796 110416192 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328113
chr1 110415968 110415982 EBF1 JASPAR yes 31448210
chr1 110415969 110415984 TFAP2A JASPAR yes 31448214
chr1 110415969 110415984 TFAP2C JASPAR yes 31448215
chr1 110415975 110415985 SP1 JASPAR yes 31448218
chr1 110415982 110415986 LFA1 TRANSFAC yes 31448219
Genes associated with rs575398179[chr1:110415982], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More