EnhancerDB
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  3. rs575461047[chr3:119872228]
Enhancers that have rs575461047[chr3:119872228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119860605 119883439 enh7479
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
chr3 119872160 119872510 vista42088
VISTA
Transcript factors that have rs575461047[chr3:119872228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119872177 119872525 EP300 UCSC Txn Factor no Conserved 108530025
chr3 119872209 119872230 ZNF263 JASPAR yes 5197464
chr3 119872209 119872230 ZNF263 JASPAR yes 71035776
chr3 119872214 119872235 ZNF263 JASPAR yes 5197465
chr3 119872214 119872235 ZNF263 JASPAR yes 71035777
chr3 119872216 119872237 IRF1 JASPAR yes 5197466
chr3 119872216 119872237 IRF1 JASPAR yes 71035778
chr3 119872217 119872232 LEF1 JASPAR yes 5197467
chr3 119872217 119872232 LEF1 JASPAR yes 71035779
chr3 119872218 119872232 TCF7L2 JASPAR yes 5197469
chr3 119872218 119872232 TCF7L2 JASPAR yes 71035781
chr3 119872218 119872233 PRDM1 JASPAR yes 5197470
chr3 119872218 119872233 STAT2 JASPAR yes 5197471
chr3 119872218 119872233 PRDM1 JASPAR yes 71035782
chr3 119872218 119872233 STAT2 JASPAR yes 71035783
chr3 119872219 119872233 STAT1 JASPAR yes 5197472
chr3 119872219 119872233 STAT1 JASPAR yes 71035784
chr3 119872220 119872232 IRF1 JASPAR yes 5197473
chr3 119872220 119872232 IRF1 JASPAR yes 71035785
chr3 119872224 119872235 FLI1 JASPAR yes 5197474
chr3 119872224 119872235 FLI1 JASPAR yes 71035786
chr3 119872225 119872229 YY1 TRANSFAC yes 5197475
chr3 119872225 119872229 YY1 TRANSFAC yes 71035787
chr3 119872226 119872234 FEV JASPAR yes 5197476
chr3 119872226 119872234 FEV JASPAR yes 71035788
chr3 119872228 119872233 ETS2 TRANSFAC yes 5197477
chr3 119872228 119872233 ETS2 TRANSFAC yes 71035789
Genes associated with rs575461047[chr3:119872228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More