EnhancerDB
  1. Home
  2. SNP
  3. rs575476333[chr3:10238345]
Enhancers that have rs575476333[chr3:10238345]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 10220648 10240655 enh20318
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr3 10238203 10238635 vista39916
VISTA
Transcript factors that have rs575476333[chr3:10238345]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 10238338 10238350 JDP2 JASPAR yes 363366
chr3 10238338 10238350 JDP2 JASPAR yes 70935723
chr3 10238340 10238347 JUN TRANSFAC yes 363367
chr3 10238340 10238347 JUN TRANSFAC yes 70935724
chr3 10238340 10238348 CREB1 JASPAR yes 363368
chr3 10238340 10238348 GMEB2 JASPAR yes 363369
chr3 10238340 10238348 CREB1 JASPAR yes 70935725
chr3 10238340 10238348 GMEB2 JASPAR yes 70935726
chr3 10238342 10238347 ATF1 TRANSFAC yes 363370
chr3 10238342 10238347 ATF1 TRANSFAC yes 70935727
Genes associated with rs575476333[chr3:10238345], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More