EnhancerDB
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  3. rs575482275[chr1:27923488]
Enhancers that have rs575482275[chr1:27923488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs575482275[chr1:27923488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27923471 27923491 TP63 JASPAR yes 27714223
chr1 27923473 27923488 TP53 JASPAR yes 27714224
chr1 27923477 27923497 TP63 JASPAR yes 27714225
chr1 27923478 27923496 TP53 JASPAR yes 27714226
chr1 27923478 27923496 TP63 JASPAR yes 27714227
chr1 27923478 27923496 TP73 JASPAR yes 27714228
chr1 27923479 27923494 TP53 JASPAR yes 27714229
chr1 27923479 27923499 TP53 JASPAR yes 27714230
chr1 27923480 27923495 TP53 JASPAR yes 27714231
chr1 27923485 27923495 MAX JASPAR yes 27714232
chr1 27923486 27923496 CLOCK JASPAR yes 27714233
chr1 27923488 27923503 FOXA1 JASPAR yes 27714234
Genes associated with rs575482275[chr1:27923488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More