EnhancerDB
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  3. rs575494285[chr1:171879408]
Enhancers that have rs575494285[chr1:171879408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171877031 171888755 enh43079
Prostate (RWPE1) Lung (A549) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs575494285[chr1:171879408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171879406 171879417 RUNX1 JASPAR yes 33097099
chr1 171879407 171879417 RUNX3 JASPAR yes 33097100
chr1 171879408 171879417 RUNX2 JASPAR yes 33097101
Genes associated with rs575494285[chr1:171879408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More