EnhancerDB
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  3. rs575513830[chr1:218546971]
Enhancers that have rs575513830[chr1:218546971]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218537025 218560381 enh12670
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs575513830[chr1:218546971]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218545972 218547014 ZNF143 GTRD no Epithelial (MCF-7) 21380685
chr1 218545972 218547014 ZNF143 GTRD no Epithelial (MCF-7) 107870136
chr1 218546150 218547069 ZNF143 GTRD no Epithelial (MCF-7) 21380686
chr1 218546150 218547069 ZNF143 GTRD no Epithelial (MCF-7) 107870138
chr1 218546160 218547051 ZNF143 GTRD no Epithelial (MCF-7) 21380687
chr1 218546160 218547051 ZNF143 GTRD no Epithelial (MCF-7) 107870139
chr1 218546262 218547035 ZNF143 GTRD no Epithelial (MCF-7) 21380689
chr1 218546262 218547035 ZNF143 GTRD no Epithelial (MCF-7) 107870141
chr1 218546338 218546983 ZNF274 GTRD no Cervix (HeLa-S3) 21380690
chr1 218546338 218546983 ZNF274 GTRD no Cervix (HeLa-S3) 107870142
chr1 218546964 218546978 XBP1 JASPAR yes 35372811
chr1 218546965 218546975 BHLHE40 JASPAR yes 35372812
chr1 218546965 218546975 MLXIPL JASPAR yes 35372813
chr1 218546965 218546975 MLX JASPAR yes 35372814
chr1 218546965 218546975 MNT JASPAR yes 35372815
chr1 218546967 218546972 MYC TRANSFAC yes 35372816
chr1 218546967 218546972 USF1 TRANSFAC yes 35372817
chr1 218546967 218546972 USF2 TRANSFAC yes 35372818
Genes associated with rs575513830[chr1:218546971], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More