EnhancerDB
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  3. rs57553733[chr1:94246523]
Enhancers that have rs57553733[chr1:94246523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs57553733[chr1:94246523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94245253 94247390 TCF7L2 GTRD no Colon (HCT116) 107815266
chr1 94246505 94246523 ESR2 JASPAR yes 30835815
chr1 94246506 94246526 ESR1 JASPAR yes 30835817
chr1 94246520 94246526 ESR1 TRANSFAC yes 30835818
chr1 94246522 94246526 ESR1 TRANSFAC yes 30835819
chr1 94246523 94246532 NKX2-8 JASPAR yes 30835820
chr1 94246523 94246533 NKX2-3 JASPAR yes 30835821
Genes associated with rs57553733[chr1:94246523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More