EnhancerDB
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  3. rs575541197[chr15:56185933]
Enhancers that have rs575541197[chr15:56185933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 56184185 56192498 enh16152
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs575541197[chr15:56185933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 56185928 56185939 CDX2 JASPAR yes 23513490
chr15 56185929 56185933 TEAD2 TRANSFAC yes 23513491
chr15 56185929 56185940 HOXA10 JASPAR yes 23513492
chr15 56185930 56185939 CDX1 JASPAR yes 23513493
chr15 56185930 56185940 HOXA13 JASPAR yes 23513494
chr15 56185930 56185940 HOXB13 JASPAR yes 23513495
chr15 56185930 56185940 HOXD13 JASPAR yes 23513496
Genes associated with rs575541197[chr15:56185933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More