EnhancerDB
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  3. rs575545015[chr2:28184589]
Enhancers that have rs575545015[chr2:28184589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575545015[chr2:28184589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28184579 28184589 EMX1 JASPAR yes 72603295
chr2 28184579 28184589 EVX2 JASPAR yes 72603296
chr2 28184579 28184589 HOXB2 JASPAR yes 72603297
chr2 28184579 28184589 MNX1 JASPAR yes 72603298
chr2 28184580 28184590 POU6F2 JASPAR yes 72603307
chr2 28184583 28184604 IRF1 JASPAR yes 72603308
chr2 28184584 28184605 IRF1 JASPAR yes 72603309
chr2 28184585 28184606 IRF1 JASPAR yes 72603310
chr2 28184586 28184601 FOXP1 JASPAR yes 72603311
chr2 28184586 28184607 IRF1 JASPAR yes 72603312
chr2 28184587 28184608 IRF1 JASPAR yes 72603313
chr2 28184588 28184603 FOXP1 JASPAR yes 72603314
chr2 28184588 28184609 IRF1 JASPAR yes 72603315
chr2 28184589 28184604 FOXP1 JASPAR yes 72603316
chr2 28184589 28184610 IRF1 JASPAR yes 72603317
Genes associated with rs575545015[chr2:28184589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More