EnhancerDB
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  3. rs575554029[chr1:110419825]
Enhancers that have rs575554029[chr1:110419825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs575554029[chr1:110419825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110419545 110420215 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820469
chr1 110419707 110420112 ZNF274 GTRD no Bone Marrow (K562) 21328128
chr1 110419707 110420112 ZNF274 GTRD no Bone Marrow (K562) 107820470
chr1 110419762 110420292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328129
chr1 110419762 110420292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820471
chr1 110419779 110420269 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820472
chr1 110419810 110419825 AR JASPAR yes 31448769
chr1 110419814 110420474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328130
chr1 110419814 110420474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820473
chr1 110419817 110420193 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820474
chr1 110419817 110420321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328131
chr1 110419817 110420321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820475
chr1 110419820 110420485 POLR2A UCSC Txn Factor no Conserved 107820476
chr1 110419821 110420361 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107820477
Genes associated with rs575554029[chr1:110419825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More