EnhancerDB
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  3. rs575562637[chr17:41402206]
Enhancers that have rs575562637[chr17:41402206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41397773 41404212 enh48037
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (OCI-LY7) Stomach Muscle (A673) Breast Uterus Pancreas Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs575562637[chr17:41402206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41401961 41402283 ZNF143 GTRD no Epithelial (MCF-7) 21759634
chr17 41402108 41402298 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21759635
chr17 41402191 41402211 TP53 JASPAR yes 54335196
chr17 41402194 41402212 TP53 JASPAR yes 54335197
chr17 41402196 41402211 TP53 JASPAR yes 54335198
chr17 41402203 41402207 LFA1 TRANSFAC yes 54335199
Genes associated with rs575562637[chr17:41402206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More