EnhancerDB
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  3. rs575563075[chr1:1609451]
Enhancers that have rs575563075[chr1:1609451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs575563075[chr1:1609451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1609069 1609701 RUNX3 UCSC Txn Factor no Conserved 107801794
chr1 1609441 1609452 FLI1 JASPAR yes 26197777
chr1 1609442 1609452 ERF JASPAR yes 26197779
chr1 1609442 1609452 ERG JASPAR yes 26197780
chr1 1609442 1609452 ETS1 JASPAR yes 26197781
chr1 1609442 1609452 FLI1 JASPAR yes 26197782
chr1 1609442 1609453 ETV2 JASPAR yes 26197783
chr1 1609442 1609454 ELF1 JASPAR yes 26197784
chr1 1609442 1609455 ELF1 JASPAR yes 26197785
chr1 1609442 1609456 SPIC JASPAR yes 26197786
chr1 1609443 1609451 FEV JASPAR yes 26197787
chr1 1609451 1609464 EOMES JASPAR yes 26197788
Genes associated with rs575563075[chr1:1609451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More