EnhancerDB
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  3. rs575580948[chr3:152854289]
Enhancers that have rs575580948[chr3:152854289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152853205 152865539 enh36001
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs575580948[chr3:152854289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 152854285 152854298 DUXA JASPAR yes 6746339
chr3 152854286 152854297 DUX4 JASPAR yes 6746340
chr3 152854286 152854297 PHOX2A JASPAR yes 6746341
chr3 152854286 152854297 PROP1 JASPAR yes 6746342
Genes associated with rs575580948[chr3:152854289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More