EnhancerDB
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  3. rs575612062[chr1:185619481]
Enhancers that have rs575612062[chr1:185619481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs575612062[chr1:185619481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185619469 185619481 POU2F1 JASPAR yes 33830621
chr1 185619469 185619483 POU1F1 JASPAR yes 33830622
chr1 185619470 185619482 POU3F1 JASPAR yes 33830623
chr1 185619470 185619482 POU3F2 JASPAR yes 33830624
chr1 185619478 185619491 SMAD2 JASPAR yes 33830627
Genes associated with rs575612062[chr1:185619481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More