EnhancerDB
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  3. rs575619600[chr16:89427389]
Enhancers that have rs575619600[chr16:89427389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575619600[chr16:89427389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 21738343
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225805
chr16 89421672 89427548 ZNF274 GTRD no Blood (GM12878) 108225806
chr16 89424317 89427605 ZNF274 GTRD no Blood (GM12878) 21738373
chr16 89424317 89427605 ZNF274 GTRD no Blood (GM12878) 108225838
chr16 89427380 89427393 SMAD2 JASPAR yes 12336309
Genes associated with rs575619600[chr16:89427389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More