EnhancerDB
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  3. rs57562398[chr6:11260328]
Enhancers that have rs57562398[chr6:11260328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs57562398[chr6:11260328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11260322 11260336 SPIC JASPAR yes 99869850
chr6 11260323 11260338 STAT2 JASPAR yes 99869851
chr6 11260324 11260336 ELF1 JASPAR yes 99869852
chr6 11260324 11260337 ELF3 JASPAR yes 99869853
chr6 11260325 11260336 ELF5 JASPAR yes 99869854
chr6 11260325 11260336 ETV2 JASPAR yes 99869855
chr6 11260326 11260336 ERG JASPAR yes 99869856
chr6 11260326 11260336 FEV JASPAR yes 99869857
chr6 11260326 11260336 FLI1 JASPAR yes 99869858
chr6 11260326 11260336 NFATC3 JASPAR yes 99869859
chr6 11260328 11260334 ETS1 JASPAR yes 99869860
Genes associated with rs57562398[chr6:11260328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More