EnhancerDB
  1. Home
  2. SNP
  3. rs575643335[chr15:56189524]
Enhancers that have rs575643335[chr15:56189524]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 56184185 56192498 enh16152
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs575643335[chr15:56189524]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 56189518 56189527 PITX3 JASPAR yes 23514092
chr15 56189518 56189528 GSC2 JASPAR yes 23514093
chr15 56189518 56189528 GSC JASPAR yes 23514094
chr15 56189519 56189527 OTX1 JASPAR yes 23514095
chr15 56189519 56189527 OTX2 JASPAR yes 23514096
chr15 56189524 56189532 EHF JASPAR yes 23514097
Genes associated with rs575643335[chr15:56189524], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More