EnhancerDB
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Enhancers that have rs575653762[chr19:2572010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs575653762[chr19:2572010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2571996 2572016 RREB1 JASPAR yes 112076693
chr19 2571998 2572018 RREB1 JASPAR yes 112076695
chr19 2571999 2572014 FOXP1 JASPAR yes 112076696
chr19 2572001 2572021 RREB1 JASPAR yes 112076697
chr19 2572005 2572011 TCF4 TRANSFAC yes 112076698
chr19 2572006 2572026 RREB1 JASPAR yes 112076699
chr19 2572007 2572028 IRF1 JASPAR yes 112076700
chr19 2572008 2572023 FOXP1 JASPAR yes 112076701
Genes associated with rs575653762[chr19:2572010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More