EnhancerDB
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  3. rs575682001[chr1:52113319]
Enhancers that have rs575682001[chr1:52113319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575682001[chr1:52113319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52113306 52113323 BCL6B JASPAR yes 28859234
chr1 52113307 52113322 STAT1 JASPAR yes 28859235
chr1 52113309 52113320 STAT1 JASPAR yes 28859236
chr1 52113309 52113320 STAT3 JASPAR yes 28859237
chr1 52113317 52113327 HOXA13 JASPAR yes 28859238
chr1 52113317 52113327 HOXB13 JASPAR yes 28859239
chr1 52113317 52113327 HOXD13 JASPAR yes 28859240
chr1 52113319 52113333 ONECUT3 JASPAR yes 28859241
Genes associated with rs575682001[chr1:52113319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More