EnhancerDB
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  3. rs575697178[chr1:225877274]
Enhancers that have rs575697178[chr1:225877274]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225875685 225891098 enh12722
Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575697178[chr1:225877274]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225876718 225879499 AR GTRD no Prostate (PC-3) 21385240
chr1 225877120 225878468 ZNF143 GTRD no Epithelial (MCF-7) 21385241
chr1 225877180 225878205 ZNF143 GTRD no Epithelial (MCF-7) 21385242
chr1 225877189 225878060 ZNF143 GTRD no Epithelial (MCF-7) 21385243
chr1 225877202 225878391 ZNF143 GTRD no Epithelial (MCF-7) 21385244
chr1 225877214 225878396 ZNF274 GTRD no Cervix (HeLa-S3) 21385245
chr1 225877215 225878193 ZNF143 GTRD no Epithelial (MCF-7) 21385246
chr1 225877247 225878296 ZNF274 GTRD no Cervix (HeLa-S3) 21385247
chr1 225877269 225877282 TFAP2A JASPAR yes 35761971
chr1 225877272 225877285 SMAD2 JASPAR yes 35761972
Genes associated with rs575697178[chr1:225877274], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More