EnhancerDB
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  3. rs575725334[chr2:217405560]
Enhancers that have rs575725334[chr2:217405560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 217395170 217407835 enh19216
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575725334[chr2:217405560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 217405548 217405563 NR2C2 JASPAR yes 80859720
chr2 217405554 217405568 JUN JASPAR yes 80859722
chr2 217405557 217405568 FOSL2 JASPAR yes 80859723
chr2 217405557 217405568 JUNB JASPAR yes 80859724
chr2 217405558 217405569 FOS JASPAR yes 80859725
chr2 217405558 217405569 FOSL1 JASPAR yes 80859726
chr2 217405558 217405569 JUND JASPAR yes 80859727
chr2 217405558 217405569 NFE2 JASPAR yes 80859728
chr2 217405559 217405568 JDP2 JASPAR yes 80859729
chr2 217405559 217405572 DUXA JASPAR yes 80859730
chr2 217405559 217405573 JUN JASPAR yes 80859731
chr2 217405560 217405571 BATF JASPAR yes 80859732
chr2 217405560 217405571 DUX4 JASPAR yes 80859733
Genes associated with rs575725334[chr2:217405560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More