EnhancerDB
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  3. rs575770378[chr19:13967450]
Enhancers that have rs575770378[chr19:13967450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575770378[chr19:13967450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13967031 13967522 ZNF143 GTRD no Epithelial (MCF-7) 21852797
chr19 13967089 13967490 ZNF143 GTRD no Epithelial (MCF-7) 21852798
chr19 13967093 13967544 ZNF143 GTRD no Epithelial (MCF-7) 21852799
chr19 13967115 13967556 ZNF143 GTRD no Epithelial (MCF-7) 21852800
chr19 13967142 13967538 ZNF274 GTRD no Liver (HepG2) 21852801
chr19 13967146 13967455 ZNF274 GTRD no Liver (HepG2) 21852802
chr19 13967162 13967469 ZNF274 GTRD no Liver (HepG2) 21852803
chr19 13967172 13967610 ZNF143 GTRD no Epithelial (MCF-7) 21852804
chr19 13967187 13967487 ZNF274 GTRD no Liver (HepG2) 21852805
chr19 13967304 13967854 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852806
chr19 13967362 13967726 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852807
chr19 13967372 13967682 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852808
chr19 13967391 13967751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852809
chr19 13967407 13967711 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852810
chr19 13967412 13967668 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852811
chr19 13967439 13967454 HNF4A JASPAR yes 112539403
chr19 13967440 13967454 TLX1 JASPAR yes 112539404
Genes associated with rs575770378[chr19:13967450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More