EnhancerDB
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  3. rs575809129[chr17:49018195]
Enhancers that have rs575809129[chr17:49018195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575809129[chr17:49018195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49017994 49019671 ZNF274 GTRD no Liver (HepG2) 21771413
chr17 49018069 49018819 ZNF274 GTRD no Cervix (HeLa-S3) 21771414
chr17 49018109 49018432 ZNF274 GTRD no Bone Marrow (K562) 21771415
chr17 49018195 49018204 NKX3-2 JASPAR yes 54736809
Genes associated with rs575809129[chr17:49018195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More