EnhancerDB
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  3. rs575909834[chr1:205248423]
Enhancers that have rs575909834[chr1:205248423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs575909834[chr1:205248423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246524 205250029 ZNF274 GTRD no Bone Marrow (K562) 21371215
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205247158 205248429 ZNF143 GTRD no Epithelial (MCF-7) 21371229
chr1 205247161 205248799 ZNF274 GTRD no Cervix (HeLa-S3) 21371231
chr1 205247337 205250086 ZNF143 GTRD no Epithelial (MCF-7) 21371235
chr1 205247390 205249048 ZNF274 GTRD no Cervix (HeLa-S3) 21371236
chr1 205247742 205250034 ZNF143 GTRD no Epithelial (MCF-7) 21371240
chr1 205248262 205248601 ZNF274 GTRD no Cervix (HeLa-S3) 21371242
chr1 205248406 205248426 RREB1 JASPAR yes 34750556
chr1 205248408 205248428 RREB1 JASPAR yes 34750557
chr1 205248409 205248429 RREB1 JASPAR yes 34750558
chr1 205248411 205248431 RREB1 JASPAR yes 34750559
chr1 205248412 205248427 RUNX2 JASPAR yes 34750560
chr1 205248413 205248423 RUNX3 JASPAR yes 34750562
chr1 205248413 205248424 RUNX1 JASPAR yes 34750563
chr1 205248414 205248434 RREB1 JASPAR yes 34750564
Genes associated with rs575909834[chr1:205248423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More