EnhancerDB
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  3. rs575918109[chr17:1900063]
Enhancers that have rs575918109[chr17:1900063]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575918109[chr17:1900063]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1900052 1900063 FOXB1 JASPAR yes 52714526
chr17 1900052 1900063 FOXC1 JASPAR yes 52714527
chr17 1900052 1900064 FOXC2 JASPAR yes 52714528
chr17 1900058 1900074 SOX8 JASPAR yes 52714529
chr17 1900060 1900064 YY1 TRANSFAC yes 52714530
Genes associated with rs575918109[chr17:1900063], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More