EnhancerDB
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  3. rs575936498[chr12:52597443]
Enhancers that have rs575936498[chr12:52597443]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52596776 52597514 vista13465
VISTA
Transcript factors that have rs575936498[chr12:52597443]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52596788 52597448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546620
chr12 52596788 52597448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033605
chr12 52596869 52597611 EP300 UCSC Txn Factor no Conserved 108033617
chr12 52596906 52597556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546624
chr12 52596906 52597556 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033624
chr12 52596929 52597619 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546626
chr12 52596929 52597619 E2F1 UCSC Txn Factor no Conserved 108033628
chr12 52596929 52597619 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033629
chr12 52596937 52597487 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546628
chr12 52596937 52597487 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033633
chr12 52596959 52597455 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546632
chr12 52596959 52597455 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033637
chr12 52596970 52597474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546634
chr12 52596970 52597474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033639
chr12 52597019 52597495 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033645
chr12 52597039 52597609 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546641
chr12 52597039 52597609 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033650
chr12 52597060 52597636 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033653
chr12 52597071 52597611 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033655
chr12 52597082 52597618 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033656
chr12 52597121 52597644 ESR1 UCSC Txn Factor no Conserved 108033659
chr12 52597147 52597623 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546645
chr12 52597147 52597623 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033660
chr12 52597163 52597627 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546647
chr12 52597163 52597627 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033662
chr12 52597169 52597673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546648
chr12 52597169 52597673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033663
chr12 52597170 52597540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546649
chr12 52597170 52597540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033664
chr12 52597198 52597694 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546650
chr12 52597198 52597694 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033665
chr12 52597210 52597706 GATA3 UCSC Txn Factor no Conserved 108033666
chr12 52597229 52597511 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546651
chr12 52597229 52597511 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033667
chr12 52597229 52597832 TFAP2C UCSC Txn Factor no Conserved 108033668
chr12 52597229 52597832 TFAP2C UCSC Txn Factor no Conserved 108033669
chr12 52597238 52597808 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546652
chr12 52597238 52597808 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033670
chr12 52597238 52597808 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033671
chr12 52597239 52597510 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546653
chr12 52597239 52597510 TFAP2A UCSC Txn Factor no Conserved 108033672
chr12 52597239 52597510 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033673
chr12 52597251 52597707 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546654
chr12 52597251 52597707 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033674
chr12 52597316 52597832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546655
chr12 52597316 52597832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033675
chr12 52597316 52597832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033676
chr12 52597345 52597755 GATA2 UCSC Txn Factor no Conserved 108033677
chr12 52597345 52597755 GATA2 UCSC Txn Factor no Conserved 108033678
chr12 52597422 52597604 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546656
chr12 52597422 52597604 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033679
chr12 52597427 52597443 ZNF143 JASPAR yes 82406628
chr12 52597427 52597443 ZNF143 JASPAR yes 120927469
chr12 52597436 52597448 E2F8 JASPAR yes 82406629
chr12 52597436 52597448 E2F8 JASPAR yes 120927470
chr12 52597437 52597448 E2F1 JASPAR yes 82406630
chr12 52597437 52597448 E2F1 JASPAR yes 120927471
chr12 52597438 52597443 SP1 TRANSFAC yes 82406631
chr12 52597438 52597443 SP1 TRANSFAC yes 120927472
chr12 52597438 52597449 E2F4 JASPAR yes 82406632
chr12 52597438 52597449 E2F6 JASPAR yes 82406633
chr12 52597438 52597449 E2F4 JASPAR yes 120927473
chr12 52597438 52597449 E2F6 JASPAR yes 120927474
chr12 52597439 52597444 SP1 TRANSFAC yes 82406634
chr12 52597439 52597444 SP1 TRANSFAC yes 120927475
chr12 52597441 52597452 NFKB1 JASPAR yes 82406635
chr12 52597441 52597452 NFKB1 JASPAR yes 120927476
chr12 52597442 52597447 ETS2 TRANSFAC yes 82406636
chr12 52597442 52597447 ETS2 TRANSFAC yes 120927477
chr12 52597442 52597452 NFKB1 JASPAR yes 82406637
chr12 52597442 52597452 RELA JASPAR yes 82406638
chr12 52597442 52597452 NFKB1 JASPAR yes 120927478
chr12 52597442 52597452 RELA JASPAR yes 120927479
chr12 52597442 52597453 NFKB1 JASPAR yes 82406639
chr12 52597442 52597453 NFKB1 JASPAR yes 120927480
Genes associated with rs575936498[chr12:52597443], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More