EnhancerDB
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  3. rs575949529[chr6:107169013]
Enhancers that have rs575949529[chr6:107169013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs575949529[chr6:107169013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107169008 107169023 HNF1A JASPAR yes 104061737
chr6 107169009 107169022 HNF1B JASPAR yes 104061738
chr6 107169012 107169022 EMX1 JASPAR yes 104061739
chr6 107169012 107169022 EVX2 JASPAR yes 104061740
chr6 107169012 107169022 HOXB2 JASPAR yes 104061741
chr6 107169012 107169022 MNX1 JASPAR yes 104061742
chr6 107169013 107169021 LMX1A JASPAR yes 104061743
chr6 107169013 107169021 LMX1B JASPAR yes 104061744
chr6 107169013 107169021 NKX6-1 JASPAR yes 104061745
chr6 107169013 107169021 NKX6-2 JASPAR yes 104061746
chr6 107169013 107169021 VAX1 JASPAR yes 104061747
chr6 107169013 107169021 VAX2 JASPAR yes 104061748
chr6 107169013 107169021 VSX1 JASPAR yes 104061749
chr6 107169013 107169021 VSX2 JASPAR yes 104061750
Genes associated with rs575949529[chr6:107169013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More