EnhancerDB
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  3. rs575954114[chr1:28737230]
Enhancers that have rs575954114[chr1:28737230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs575954114[chr1:28737230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28737211 28737232 IRF1 JASPAR yes 27767340
chr1 28737212 28737233 IRF1 JASPAR yes 27767342
chr1 28737217 28737232 FOXP1 JASPAR yes 27767343
chr1 28737222 28737237 FOXP1 JASPAR yes 27767344
chr1 28737225 28737235 HOXB13 JASPAR yes 27767345
chr1 28737229 28737233 YY1 TRANSFAC yes 27767346
Genes associated with rs575954114[chr1:28737230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More