EnhancerDB
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  3. rs575978686[chr1:27464747]
Enhancers that have rs575978686[chr1:27464747]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575978686[chr1:27464747]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27464740 27464750 ZNF740 JASPAR yes 27680639
chr1 27464740 27464754 GLIS2 JASPAR yes 27680640
chr1 27464740 27464754 GLIS3 JASPAR yes 27680641
chr1 27464741 27464756 TFAP2C JASPAR yes 27680642
chr1 27464743 27464756 TFAP2A JASPAR yes 27680643
chr1 27464743 27464756 TFAP2B JASPAR yes 27680644
chr1 27464743 27464756 TFAP2C JASPAR yes 27680645
chr1 27464744 27464758 PLAG1 JASPAR yes 27680646
Genes associated with rs575978686[chr1:27464747], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More