EnhancerDB
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  3. rs575979060[chr3:8543335]
Enhancers that have rs575979060[chr3:8543335]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs575979060[chr3:8543335]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8543322 8543336 ATF7 JASPAR yes 297336
chr3 8543322 8543336 BATF3 JASPAR yes 297337
chr3 8543323 8543335 JDP2 JASPAR yes 297338
chr3 8543330 8543339 THAP1 JASPAR yes 297342
chr3 8543332 8543349 RXRA JASPAR yes 297343
chr3 8543333 8543337 LFA1 TRANSFAC yes 297344
Genes associated with rs575979060[chr3:8543335], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More