EnhancerDB
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  3. rs575992328[chr16:29277971]
Enhancers that have rs575992328[chr16:29277971]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs575992328[chr16:29277971]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29277913 29278243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191388
chr16 29277918 29278238 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191389
chr16 29277923 29278203 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191390
chr16 29277949 29278229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191391
chr16 29277950 29278226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191392
chr16 29277961 29278221 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108191393
chr16 29277963 29277981 NFYA JASPAR yes 10255778
chr16 29277966 29277976 EN2 JASPAR yes 10255779
chr16 29277967 29277971 H1TF2 TRANSFAC yes 10255780
chr16 29277967 29277971 NFE TRANSFAC yes 10255781
chr16 29277967 29277971 SRF TRANSFAC yes 10255782
chr16 29277968 29277987 CTCF JASPAR yes 10255783
chr16 29277969 29278213 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108191394
Genes associated with rs575992328[chr16:29277971], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More