EnhancerDB
  1. Home
  2. SNP
  3. rs576007070[chr1:17903129]
Enhancers that have rs576007070[chr1:17903129]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs576007070[chr1:17903129]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17903120 17903136 RFX2 JASPAR yes 27104005
chr1 17903120 17903136 RFX3 JASPAR yes 27104006
chr1 17903120 17903136 RFX4 JASPAR yes 27104007
chr1 17903120 17903136 RFX5 JASPAR yes 27104008
chr1 17903121 17903140 RFX2 JASPAR yes 27104009
chr1 17903123 17903138 RFX5 JASPAR yes 27104011
Genes associated with rs576007070[chr1:17903129], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More