EnhancerDB
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  3. rs576020296[chr12:124978431]
Enhancers that have rs576020296[chr12:124978431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs576020296[chr12:124978431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124978333 124979038 POLR2A UCSC Txn Factor no Conserved 108068747
chr12 124978375 124979059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580874
chr12 124978375 124979059 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068748
chr12 124978399 124978981 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21580875
chr12 124978399 124978981 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068749
chr12 124978421 124978433 NHLH1 JASPAR yes 124384485
chr12 124978422 124978432 NHLH1 JASPAR yes 124384486
Genes associated with rs576020296[chr12:124978431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More