EnhancerDB
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  3. rs576072877[chr1:23879314]
Enhancers that have rs576072877[chr1:23879314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23868685 23885215 enh126
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs576072877[chr1:23879314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23879302 23879315 ZBTB18 JASPAR yes 27441121
chr1 23879303 23879315 PKNOX1 JASPAR yes 27441122
chr1 23879303 23879315 TGIF1 JASPAR yes 27441123
chr1 23879304 23879314 FIGLA JASPAR yes 27441125
chr1 23879304 23879314 ID4 JASPAR yes 27441126
chr1 23879304 23879314 TCF3 JASPAR yes 27441127
chr1 23879304 23879314 TCF4 JASPAR yes 27441128
chr1 23879306 23879315 ZEB1 JASPAR yes 27441129
chr1 23879306 23879316 TBX21 JASPAR yes 27441130
chr1 23879307 23879315 MGA JASPAR yes 27441131
chr1 23879307 23879315 TBX15 JASPAR yes 27441132
chr1 23879307 23879315 TBX1 JASPAR yes 27441133
chr1 23879307 23879315 TBX4 JASPAR yes 27441134
chr1 23879307 23879315 TBX5 JASPAR yes 27441135
chr1 23879307 23879317 TBR1 JASPAR yes 27441136
chr1 23879307 23879320 SMAD2 JASPAR yes 27441137
chr1 23879311 23879322 FOSL2 JASPAR yes 27441138
Genes associated with rs576072877[chr1:23879314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More