EnhancerDB
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  3. rs576419925[chr1:54782382]
Enhancers that have rs576419925[chr1:54782382]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs576419925[chr1:54782382]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54782367 54782382 FOXP1 JASPAR yes 28972684
chr1 54782367 54782382 HNF1A JASPAR yes 28972685
chr1 54782368 54782382 POU4F1 JASPAR yes 28972686
chr1 54782368 54782383 FOXA1 JASPAR yes 28972687
chr1 54782368 54782384 POU4F2 JASPAR yes 28972688
chr1 54782368 54782384 POU4F3 JASPAR yes 28972689
chr1 54782370 54782382 FOXI1 JASPAR yes 28972694
chr1 54782371 54782385 ONECUT2 JASPAR yes 28972695
chr1 54782371 54782385 ONECUT3 JASPAR yes 28972696
chr1 54782371 54782386 FOXP1 JASPAR yes 28972697
chr1 54782371 54782386 HNF1A JASPAR yes 28972698
chr1 54782372 54782386 POU4F1 JASPAR yes 28972699
chr1 54782372 54782387 FOXA1 JASPAR yes 28972700
chr1 54782373 54782384 FOXB1 JASPAR yes 28972701
chr1 54782373 54782384 FOXC1 JASPAR yes 28972702
chr1 54782373 54782384 PROP1 JASPAR yes 28972703
chr1 54782373 54782385 FOXC2 JASPAR yes 28972704
chr1 54782374 54782386 FOXI1 JASPAR yes 28972705
Genes associated with rs576419925[chr1:54782382], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More