EnhancerDB
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  3. rs576557950[chr12:50983021]
Enhancers that have rs576557950[chr12:50983021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs576557950[chr12:50983021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50983006 50983021 FOXP1 JASPAR yes 120848375
chr12 50983009 50983030 IRF1 JASPAR yes 120848377
chr12 50983015 50983036 IRF1 JASPAR yes 120848378
chr12 50983016 50983022 LEF1 TRANSFAC yes 120848379
chr12 50983016 50983022 SOX10 JASPAR yes 120848380
chr12 50983016 50983031 FOXP1 JASPAR yes 120848381
chr12 50983017 50983028 FOXP2 JASPAR yes 120848382
chr12 50983017 50983029 FOXC2 JASPAR yes 120848383
chr12 50983017 50983032 STAT2 JASPAR yes 120848384
chr12 50983018 50983033 FOXP1 JASPAR yes 120848385
chr12 50983020 50983035 FOXP1 JASPAR yes 120848386
chr12 50983021 50983036 FOXP1 JASPAR yes 120848387
Genes associated with rs576557950[chr12:50983021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More